STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MPLA_160040Antibiotic biosynthesis monooxygenase. (103 aa)    
Predicted Functional Partners:
MPLA_140050
Putative aldolase.
  
 
 0.614
MPLA_670021
Anaerobic dehydrogenase, typically selenocysteine-containing; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
    
  0.611
MPLA_160039
3-ketoacyl-CoA reductase PhaB.
       0.610
MPLA_1100019
Ferredoxin.
     
  0.606
yeaX
Putative dioxygenase subunit.
     
  0.606
abrB
Putative membrane protein.
       0.574
MPLA_160042
Short-chain dehydrogenase/reductase SDR.
       0.488
MPLA_160038
DrsE domain-containing protein.
       0.444
xylB
Xylulose kinase.
   
 
 0.423
MPLA_340064
Carbohydrate kinase.
   
 
 0.423
Your Current Organism:
Mesorhizobium sp. ORS3359
NCBI taxonomy Id: 408184
Other names: M. sp. ORS 3359, Mesorhizobium sp. ORS 3359
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