STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AmacrAlpha-methylacyl-CoA racemase; Belongs to the CoA-transferase III family. (395 aa)    
Predicted Functional Partners:
MPLA_160061
Putative enzyme; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
 
  0.877
mutB
Methylmalonyl-CoA mutase large subunit (MCM-alpha).
    
 0.788
maeB
Putative fused malic enzyme oxidoreductase phosphotransacetylase.
     
 0.707
maeB-2
Putative fused malic enzyme oxidoreductase phosphotransacetylase.
     
 0.707
MPLA_160060
GCN5-related N-acetyltransferase.
       0.682
MPLA_870003
AMP-dependent synthetase and ligase.
    
 0.675
MPLA_160063
DUF2470 domain-containing protein.
       0.673
MPLA_760008
Fumarate hydratase class I; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family.
    
  0.661
MPLA_340130
Indolepyruvate ferredoxin oxidoreductase.
    
 0.656
MPLA_1680006
3-hydroxyacyl-CoA dehydrogenase NAD-binding protein.
 
 
 0.619
Your Current Organism:
Mesorhizobium sp. ORS3359
NCBI taxonomy Id: 408184
Other names: M. sp. ORS 3359, Mesorhizobium sp. ORS 3359
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