STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
soxB-2Sarcosine oxidase subunit beta. (417 aa)    
Predicted Functional Partners:
MPLA_160087
Sarcosine oxidase, alpha subunit family; Belongs to the GcvT family.
 
 0.996
MPLA_160088
Sarcosine oxidase, delta subunit family.
 
  0.993
soxA
Sarcosine oxidase subunit alpha.
 
 0.986
MPLA_140256
Uncharacterized protein.
 
  0.970
MPLA_160086
Uncharacterized protein.
  
  0.969
soxD
Sarcosine oxidase subunit delta.
 
 0.964
soxA-2
Sarcosine oxidase subunit alpha.
 
 0.957
soxA-3
Sarcosine oxidase subunit alpha.
 
 0.957
soxA-4
Sarcosine oxidase subunit alpha.
 
 0.957
soxD-3
Sarcosine oxidase subunit delta.
  
  0.904
Your Current Organism:
Mesorhizobium sp. ORS3359
NCBI taxonomy Id: 408184
Other names: M. sp. ORS 3359, Mesorhizobium sp. ORS 3359
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.