STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MPLA_160099Sugar isomerase (SIS). (338 aa)    
Predicted Functional Partners:
MPLA_160100
PfkB domain-containing protein.
 
 
  0.951
MPLA_160098
Binding-protein-dependent transport systems inner membrane component.
 
    0.911
MPLA_160097
Binding-protein-dependent transport systems inner membrane component.
 
    0.852
MPLA_160096
Extracellular solute-binding protein family 1.
 
    0.847
ugpC-6
Sn-glycerol-3-phosphate import ATP-binding protein UgpC; Belongs to the ABC transporter superfamily.
  
    0.806
nagA
N-acetylglucosamine-6-phosphate deacetylase.
 
 
 0.758
gltB
Glutamate synthase, large subunit.
     
  0.670
MPLA_160095
ROK family protein.
 
  
  0.664
MPLA_1800158
Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase.
     
  0.650
MPLA_1830212
Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; Belongs to the mannose-6-phosphate isomerase type 2 family.
     
  0.650
Your Current Organism:
Mesorhizobium sp. ORS3359
NCBI taxonomy Id: 408184
Other names: M. sp. ORS 3359, Mesorhizobium sp. ORS 3359
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