Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MPLA_1610011Uncharacterized protein. (65 aa)    
Predicted Functional Partners:
MPLA_1610012
Family 1 extracellular solute-binding protein.
       0.538
MPLA_1610013
Binding-protein-dependent transport systems inner membrane component.
       0.416
MPLA_1610014
Binding-protein-dependent transport systems inner membrane component.
       0.416
MPLA_1610015
Uncharacterized protein.
       0.416
ugpC-7
Sn-glycerol-3-phosphate import ATP-binding protein UgpC; Belongs to the ABC transporter superfamily.
       0.416
yurJ
Uncharacterized ABC transporter ATP-binding protein YurJ; Belongs to the ABC transporter superfamily.
       0.416
Your Current Organism:
Mesorhizobium sp. ORS3359
NCBI taxonomy Id: 408184
Other names: M. sp. ORS 3359, Mesorhizobium sp. ORS 3359
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