STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MPLA_1610024D-tagatose 3-epimerase. (295 aa)    
Predicted Functional Partners:
MPLA_140002
Xylose isomerase domain protein TIM barrel.
 
     0.682
gyaR
Glyoxylate reductase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
    
  0.675
MPLA_1610023
Mandelate racemase/muconate lactonizing protein.
 
     0.672
MPLA_1610022
GntR domain protein.
       0.612
trpE(G
Anthranilate synthase.
    
  0.589
xylB
Xylulose kinase.
    
  0.549
MPLA_340067
Uncharacterized protein.
    
  0.549
MPLA_1610027
Uncharacterized oxidoreductase y4hM.
 
 
  0.515
fucA
L-fuculose-1-phosphate aldolase.
     
  0.503
MPLA_1160017
Uncharacterized protein.
  
 
 0.477
Your Current Organism:
Mesorhizobium sp. ORS3359
NCBI taxonomy Id: 408184
Other names: M. sp. ORS 3359, Mesorhizobium sp. ORS 3359
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.