Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MPLA_1610027Uncharacterized oxidoreductase y4hM. (395 aa)    
Predicted Functional Partners:
MPLA_1610026
Uncharacterized protein.
 
 
  0.936
MPLA_1620032
Xylose isomerase domain protein TIM barrel.
 
 
  0.691
MPLA_140002
Xylose isomerase domain protein TIM barrel.
 
 
  0.688
MPLA_1610028
Xylose isomerase domain-containing protein TIM barrel.
 
 
  0.663
MPLA_1610024
D-tagatose 3-epimerase.
 
 
  0.515
mocC-2
Rhizopine catabolism protein MocC.
  
 
  0.510
MPLA_1390090
Xylose isomerase domain protein TIM barrel.
  
 
  0.502
mocC
Rhizopine catabolism protein MocC.
  
 
  0.485
MPLA_140044
Xylose isomerase domain protein TIM barrel.
  
 
  0.477
xylA
Xylose isomerase; Belongs to the xylose isomerase family.
 
  
  0.449
Your Current Organism:
Mesorhizobium sp. ORS3359
NCBI taxonomy Id: 408184
Other names: M. sp. ORS 3359, Mesorhizobium sp. ORS 3359
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