STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MPLA_1620033Oxidoreductase domain protein. (380 aa)    
Predicted Functional Partners:
MPLA_1620032
Xylose isomerase domain protein TIM barrel.
 
 
  0.967
MPLA_1620029
Binding-protein-dependent transport systems inner membrane component.
 
     0.858
MPLA_1620030
Binding-protein-dependent transport systems inner membrane component.
 
     0.848
MPLA_1620028
Extracellular solute-binding protein family 1.
 
     0.820
MPLA_1720001
ThuA domain-containing protein.
 
  
  0.758
MPLA_1160014
Uncharacterized protein.
  
 
  0.735
MPLA_1290002
ThuA domain-containing protein.
 
    0.727
ugpC-8
Glycerol-3-phosphate transporter subunit ATP-binding component of ABC superfamily; Belongs to the ABC transporter superfamily.
 
     0.725
MPLA_140002
Xylose isomerase domain protein TIM barrel.
  
 
  0.676
MPLA_250066
Xylose isomerase domain-containing protein TIM barrel.
  
 
  0.634
Your Current Organism:
Mesorhizobium sp. ORS3359
NCBI taxonomy Id: 408184
Other names: M. sp. ORS 3359, Mesorhizobium sp. ORS 3359
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