Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MPLA_1620088Uncharacterized protein. (768 aa)    
Predicted Functional Partners:
MPLA_870020
Uncharacterized protein.
  
  0.877
MPLA_870039
Outer membrane adhesin like proteiin (Modular protein).
 
  0.813
MPLA_1430035
Membrane fusion protein (MFP) family protein.
 
 
 0.804
MPLA_870037
Membrane fusion protein (MFP) family protein.
 
 
 0.802
prsE-3
Membrane fusion protein (MFP) family protein.
 
 
 0.794
prsE
Membrane fusion protein (MFP) family protein.
 
 
 0.791
prsE-2
Membrane fusion protein (MFP) family protein.
 
 
 0.789
gltB
Glutamate synthase, large subunit.
     
 0.781
MPLA_1860014
Membrane fusion protein (MFP) family protein.
 
 
 0.779
nodO
Nodulation protein O.
  
     0.770
Your Current Organism:
Mesorhizobium sp. ORS3359
NCBI taxonomy Id: 408184
Other names: M. sp. ORS 3359, Mesorhizobium sp. ORS 3359
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