Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MPLA_1650106Uncharacterized protein. (508 aa)    
Predicted Functional Partners:
MPLA_1650104
Uncharacterized protein.
 
     0.956
MPLA_1650103
DUF2220 domain-containing protein.
 
     0.950
MPLA_1650105
Uncharacterized protein.
       0.816
MPLA_760018
Uncharacterized protein.
  
     0.704
msi
Putative SIMILARITY TO EPOXIDASE SUBUNIT A PROTEIN.
  
     0.700
nolV
Nodulation protein NolV.
  
     0.681
MPLA_670018
Uncharacterized protein.
  
     0.660
MPLA_680023
ULP_PROTEASE domain-containing protein.
  
     0.656
MPLA_2130131
Putative fusion protein: integrase catalytic region and hypothetical conserved protein.
  
     0.652
MPLA_680001
Putative fusion protein: integrase catalytic region and hypothetical conserved protein.
  
     0.649
Your Current Organism:
Mesorhizobium sp. ORS3359
NCBI taxonomy Id: 408184
Other names: M. sp. ORS 3359, Mesorhizobium sp. ORS 3359
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