STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MPLA_1670004Putative ROK-family transcriptional regulator. (367 aa)    
Predicted Functional Partners:
MPLA_1800132
Periplasmic binding protein/LacI transcriptional regulator.
 
    0.750
MPLA_1800134
ABC transporter.
 
     0.723
MPLA_930054
dTDP-4-dehydrorhamnose reductase; Belongs to the glycosyl hydrolase 1 family.
  
 
 0.670
MPLA_1170058
APH domain-containing protein.
    
  0.631
MPLA_1670005
SGNH_hydro domain-containing protein.
       0.625
MPLA_1670006
Uncharacterized protein.
       0.625
MPLA_1800158
Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase.
    
  0.600
MPLA_1830212
Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; Belongs to the mannose-6-phosphate isomerase type 2 family.
    
  0.600
MPLA_1800133
Inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
  
    0.592
nagA
N-acetylglucosamine-6-phosphate deacetylase.
 
 
 0.581
Your Current Organism:
Mesorhizobium sp. ORS3359
NCBI taxonomy Id: 408184
Other names: M. sp. ORS 3359, Mesorhizobium sp. ORS 3359
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