Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
dthadhD-threo-3-hydroxyaspartate dehydratase. (393 aa)    
Predicted Functional Partners:
MPLA_1670016
Endoribonuclease L-PSP.
 
     0.809
MPLA_1670015
FAD dependent oxidoreductase.
 
  
  0.671
sgaA
Serine--glyoxylate aminotransferase.
    
  0.600
gcvP
Glycine dehydrogenase (decarboxylating); The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.
     
  0.591
glcE
Glycolate oxidase FAD binding subunit.
  
 
  0.585
eda
annotation not available
    
  0.571
aceA
Isocitrate lyase.
     
  0.560
glcF
Glycolate oxidase iron-sulfur subunit.
     
  0.560
allA
Ureidoglycolate lyase; Catalyzes the catabolism of the allantoin degradation intermediate (S)-ureidoglycolate, generating urea and glyoxylate. Involved in the utilization of allantoin as nitrogen source.
     
  0.560
MPLA_810026
Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
     
  0.560
Your Current Organism:
Mesorhizobium sp. ORS3359
NCBI taxonomy Id: 408184
Other names: M. sp. ORS 3359, Mesorhizobium sp. ORS 3359
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