Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MPLA_1680008Repressor protein CI; Belongs to the peptidase S24 family. (212 aa)    
Predicted Functional Partners:
MPLA_1680009
Uncharacterized protein.
       0.837
MPLA_320007
Uncharacterized protein.
  
     0.580
MPLA_1680007
Uncharacterized protein.
       0.542
lepB
Signal peptidase I; Belongs to the peptidase S26 family.
  
 
  0.524
MPLA_1680006
3-hydroxyacyl-CoA dehydrogenase NAD-binding protein.
       0.521
MPLA_580056
Uncharacterized protein.
  
     0.509
MPLA_1680005
Putative acyl-CoA thiolase; Belongs to the thiolase-like superfamily. Thiolase family.
       0.502
MPLA_1380004
TPR_REGION domain-containing protein.
  
     0.480
MPLA_570048
Uncharacterized protein.
  
     0.447
MPLA_1650159
Uncharacterized protein.
  
     0.443
Your Current Organism:
Mesorhizobium sp. ORS3359
NCBI taxonomy Id: 408184
Other names: M. sp. ORS 3359, Mesorhizobium sp. ORS 3359
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