Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MPLA_1680011TerB domain-containing protein. (137 aa)    
Predicted Functional Partners:
MPLA_640001
UspA domain-containing protein.
  
     0.629
MPLA_1220017
DUF2062 domain-containing protein.
  
     0.619
lysS
Lysine--tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family.
       0.612
MPLA_1380017
Uncharacterized protein.
  
     0.590
MPLA_1230029
Peptidoglycan-binding lysin domain protein.
  
     0.576
MPLA_1190085
DnaJ-like protein.
  
     0.563
MPLA_1380018
Probable membrane transporter protein.
  
     0.547
MPLA_1550027
Transcriptional regulator, MarR family.
  
     0.527
MPLA_440034
Uncharacterized protein.
  
     0.499
MPLA_510010
YCII domain-containing protein.
  
     0.490
Your Current Organism:
Mesorhizobium sp. ORS3359
NCBI taxonomy Id: 408184
Other names: M. sp. ORS 3359, Mesorhizobium sp. ORS 3359
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