Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
MPLA_1690002 | MPLA_1690003 | LuxR family transcriptional regulator. | Uncharacterized protein. | 0.490 |
MPLA_1690002 | MPLA_1690004 | LuxR family transcriptional regulator. | Acyl-homoserine-lactone synthase. | 0.978 |
MPLA_1690003 | MPLA_1690002 | Uncharacterized protein. | LuxR family transcriptional regulator. | 0.490 |
MPLA_1690003 | MPLA_1690004 | Uncharacterized protein. | Acyl-homoserine-lactone synthase. | 0.608 |
MPLA_1690003 | MPLA_1690005 | Uncharacterized protein. | Enoyl-CoA hydratase/isomerase. | 0.608 |
MPLA_1690004 | MPLA_1690002 | Acyl-homoserine-lactone synthase. | LuxR family transcriptional regulator. | 0.978 |
MPLA_1690004 | MPLA_1690003 | Acyl-homoserine-lactone synthase. | Uncharacterized protein. | 0.608 |
MPLA_1690004 | MPLA_1690005 | Acyl-homoserine-lactone synthase. | Enoyl-CoA hydratase/isomerase. | 0.789 |
MPLA_1690005 | MPLA_1690003 | Enoyl-CoA hydratase/isomerase. | Uncharacterized protein. | 0.608 |
MPLA_1690005 | MPLA_1690004 | Enoyl-CoA hydratase/isomerase. | Acyl-homoserine-lactone synthase. | 0.789 |