MPLA_1690035 protein (Mesorhizobium sp. ORS3359)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

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[Homology]

Score

MPLA_1690035

Uncharacterized protein. (143 aa)

Predicted Functional Partners:

MPLA_1650044

0.734

MPLA_1800072

0.704

MPLA_20029

0.701

pyrD

0.691

MPLA_1500005

0.663

MPLA_1690034

0.638

MPLA_1830032

0.607

MPLA_1270032

0.603

MPLA_30076

0.603

MPLA_160023

0.596

Your Current Organism:

Mesorhizobium sp. ORS3359

NCBI taxonomy Id: 408184
Other names: M. sp. ORS 3359, Mesorhizobium sp. ORS 3359

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TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
MPLA_1270032	MPLA_1650044	MPLA_1270032	MPLA_1650044	Uncharacterized protein.	AsmA family protein.	0.565
MPLA_1270032	MPLA_1690035	MPLA_1270032	MPLA_1690035	Uncharacterized protein.	Uncharacterized protein.	0.603
MPLA_1270032	MPLA_1800072	MPLA_1270032	MPLA_1800072	Uncharacterized protein.	Uncharacterized protein.	0.766
MPLA_1270032	MPLA_1830032	MPLA_1270032	MPLA_1830032	Uncharacterized protein.	Asp_Arg_Hydrox domain-containing protein.	0.472
MPLA_1270032	MPLA_30076	MPLA_1270032	MPLA_30076	Uncharacterized protein.	DUF3971 domain-containing protein.	0.522
MPLA_1500005	MPLA_1650044	MPLA_1500005	MPLA_1650044	Uncharacterized protein.	AsmA family protein.	0.471
MPLA_1500005	MPLA_1690035	MPLA_1500005	MPLA_1690035	Uncharacterized protein.	Uncharacterized protein.	0.663
MPLA_1500005	MPLA_1800072	MPLA_1500005	MPLA_1800072	Uncharacterized protein.	Uncharacterized protein.	0.401
MPLA_1500005	MPLA_20029	MPLA_1500005	MPLA_20029	Uncharacterized protein.	Peptidase M50.	0.454
MPLA_160023	MPLA_1690035	MPLA_160023	MPLA_1690035	Uncharacterized protein.	Uncharacterized protein.	0.596
MPLA_160023	MPLA_1830032	MPLA_160023	MPLA_1830032	Uncharacterized protein.	Asp_Arg_Hydrox domain-containing protein.	0.568
MPLA_160023	MPLA_20029	MPLA_160023	MPLA_20029	Uncharacterized protein.	Peptidase M50.	0.745
MPLA_160023	MPLA_30076	MPLA_160023	MPLA_30076	Uncharacterized protein.	DUF3971 domain-containing protein.	0.463
MPLA_1650044	MPLA_1270032	MPLA_1650044	MPLA_1270032	AsmA family protein.	Uncharacterized protein.	0.565
MPLA_1650044	MPLA_1500005	MPLA_1650044	MPLA_1500005	AsmA family protein.	Uncharacterized protein.	0.471
MPLA_1650044	MPLA_1690035	MPLA_1650044	MPLA_1690035	AsmA family protein.	Uncharacterized protein.	0.734
MPLA_1650044	MPLA_1800072	MPLA_1650044	MPLA_1800072	AsmA family protein.	Uncharacterized protein.	0.514
MPLA_1650044	MPLA_1830032	MPLA_1650044	MPLA_1830032	AsmA family protein.	Asp_Arg_Hydrox domain-containing protein.	0.494
MPLA_1650044	MPLA_20029	MPLA_1650044	MPLA_20029	AsmA family protein.	Peptidase M50.	0.615
MPLA_1650044	MPLA_30076	MPLA_1650044	MPLA_30076	AsmA family protein.	DUF3971 domain-containing protein.	0.654