STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
hbdA3-hydroxybutyryl-CoA dehydrogenase (Beta-hydroxybutyryl-CoA dehydrogenase) (BHBD). (292 aa)    
Predicted Functional Partners:
MPLA_140299
Enoyl-CoA hydratase/isomerase.
 0.995
MPLA_740014
Putative enoyl-CoA hydratase-isomerase.
 0.995
paaF
Enoyl-CoA hydratase-isomerase; Belongs to the enoyl-CoA hydratase/isomerase family.
 0.995
phbA
Acetyl-CoA acetyltransferase with thiolase domain (Acetoacetyl-CoA thiolase); Belongs to the thiolase-like superfamily. Thiolase family.
 0.988
MPLA_1680005
Putative acyl-CoA thiolase; Belongs to the thiolase-like superfamily. Thiolase family.
 0.983
yqeF
Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
 0.974
MPLA_1800165
Putative 3-ketoacyl-CoA thiolase; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.970
paaE
Beta-ketoadipyl CoA thiolase; Belongs to the thiolase-like superfamily. Thiolase family.
 0.969
MPLA_1290017
Hydroxycinnamoyl-CoA hydratase-lyase.
 0.957
MPLA_1390105
Putative acetyl-CoA C-acetyltransferase.
  
 0.942
Your Current Organism:
Mesorhizobium sp. ORS3359
NCBI taxonomy Id: 408184
Other names: M. sp. ORS 3359, Mesorhizobium sp. ORS 3359
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