STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MPLA_1770002Major facilitator superfamily MFS_1. (422 aa)    
Predicted Functional Partners:
MPLA_1770001
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
 
     0.608
MPLA_1290015
Acid phosphatase.
  
  
  0.571
ynbC
Putative hydrolase.
  
  
  0.506
MPLA_160045
Major facilitator superfamily MFS_1.
  
     0.502
MPLA_1770003
Cell wall hydrolase SleB.
       0.467
MPLA_1590010
Transposase.
  
     0.445
MPLA_1650004
TolC family type I secretion outer membrane protein.
   
  0.445
MPLA_300008
RND efflux system, outer membrane lipoprotein, NodT family.
   
  0.445
bepC
Outer membrane efflux protein BepC.
   
  0.445
MPLA_1800181
YadA domain protein.
  
     0.444
Your Current Organism:
Mesorhizobium sp. ORS3359
NCBI taxonomy Id: 408184
Other names: M. sp. ORS 3359, Mesorhizobium sp. ORS 3359
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