Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MPLA_1780009DUF2007 domain-containing protein. (74 aa)    
Predicted Functional Partners:
MPLA_1780008
MTS domain-containing protein; Belongs to the methyltransferase superfamily.
       0.847
MPLA_1780007
Peptidase S49.
 
     0.748
MPLA_220047
Uncharacterized protein.
 
     0.674
ispB
Octaprenyl diphosphate synthase; Belongs to the FPP/GGPP synthase family.
       0.671
yraL
Ribosomal RNA small subunit methyltransferase I; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA.
  
  
 0.661
MPLA_150021
Uncharacterized protein.
  
     0.591
hisE
Phosphoribosyl-ATP pyrophosphatase.
     
  0.580
MPLA_150022
Uncharacterized protein.
  
     0.564
MPLA_1780006
Uncharacterized protein.
       0.525
MPLA_320189
Uncharacterized protein.
  
     0.519
Your Current Organism:
Mesorhizobium sp. ORS3359
NCBI taxonomy Id: 408184
Other names: M. sp. ORS 3359, Mesorhizobium sp. ORS 3359
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