Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MPLA_1800016Inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family. (416 aa)    
Predicted Functional Partners:
MPLA_1800015
ABC transporter related protein.
 
 
  0.973
MPLA_1800014
Sugar ABC transporter.
 
 
 0.962
rbtD
Ribitol 2-dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
     0.832
xylF
D-xylose transporter subunit periplasmic-binding component of ABC superfamily.
 
 
 0.820
chvE
Multiple sugar-binding periplasmic receptor ChvE.
 
 
 0.755
MPLA_770012
Ribose ABC transporter, ribose-binding protein.
  
  
  0.734
xylH-2
D-xylose transporter subunit membrane component of ABC superfamily; Belongs to the binding-protein-dependent transport system permease family.
  
  
 
0.721
MPLA_180109
ABC transporter.
 
 
  0.693
MPLA_90076
ABC transporter-like protein.
 
 
  0.686
MPLA_90065
Putative ABC transporter ATP-binding protein.
 
 
  0.680
Your Current Organism:
Mesorhizobium sp. ORS3359
NCBI taxonomy Id: 408184
Other names: M. sp. ORS 3359, Mesorhizobium sp. ORS 3359
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