Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MPLA_1800077Uncharacterized protein. (169 aa)    
Predicted Functional Partners:
MPLA_1800078
Thioredoxin domain-containing protein.
 
     0.752
MPLA_1550054
Uncharacterized protein.
  
     0.724
lptD
LPS-assembly protein LptD; Involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane; Belongs to the LptD family.
  
     0.719
MPLA_650002
TPR_21 domain-containing protein.
  
     0.709
MPLA_1830072
Septum formation initiator.
  
     0.705
MPLA_1800075
HAD-superfamily hydrolase, subfamily IA, variant 3.
       0.704
yfhQ
Adenine DNA glycosylase; Adenine glycosylase active on G-A mispairs.
       0.695
MPLA_810043
DUF448 domain-containing protein.
  
     0.654
MPLA_1830125
Invasion associated locus B family protein.
  
     0.642
MPLA_220038
Cell division protein.
  
     0.621
Your Current Organism:
Mesorhizobium sp. ORS3359
NCBI taxonomy Id: 408184
Other names: M. sp. ORS 3359, Mesorhizobium sp. ORS 3359
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