Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MPLA_1800078Thioredoxin domain-containing protein. (248 aa)    
Predicted Functional Partners:
MPLA_1700020
Uncharacterized protein.
 
 
 0.842
MPLA_1800077
Uncharacterized protein.
 
     0.752
smc
Chromosome partition protein Smc; Required for chromosome condensation and partitioning. Belongs to the SMC family.
       0.685
lepB
Signal peptidase I; Belongs to the peptidase S26 family.
  
     0.622
folK
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase.
    
  0.616
MPLA_230013
DSBA oxidoreductase.
  
   
 0.600
MPLA_1830127
DSBA oxidoreductase.
    
 0.576
yfhQ
Adenine DNA glycosylase; Adenine glycosylase active on G-A mispairs.
     
 0.572
recO
DNA repair protein RecO; Involved in DNA repair and RecF pathway recombination.
  
  
 0.516
MPLA_810048
Uncharacterized HTH-type transcriptional regulator Smed_0045.
  
     0.515
Your Current Organism:
Mesorhizobium sp. ORS3359
NCBI taxonomy Id: 408184
Other names: M. sp. ORS 3359, Mesorhizobium sp. ORS 3359
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