Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MPLA_1800092Polysaccharide deacetylase. (260 aa)    
Predicted Functional Partners:
MPLA_1800091
Glycosyl transferase family protein.
       0.517
MPLA_1830298
Lectin-like protein BA14k.
  
     0.498
tktA
Transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate.
     
  0.468
MPLA_2130045
Pyruvate dehydrogenase E1 component; Component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).
     
  0.468
MPLA_830058
Uncharacterized protein.
     
  0.468
MPLA_1830130
ATP-binding protein of ABC-transporter.
  
     0.467
MPLA_590013
Uncharacterized protein.
  
  
  0.465
melA-2
Alpha-galactosidase.
  
  
  0.459
agpA
Periplasmic alpha-galactoside-binding protein.
  
     0.437
MPLA_250047
Uncharacterized protein.
  
   
 0.427
Your Current Organism:
Mesorhizobium sp. ORS3359
NCBI taxonomy Id: 408184
Other names: M. sp. ORS 3359, Mesorhizobium sp. ORS 3359
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