yliB protein (Mesorhizobium sp. ORS3359) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

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a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

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textmining

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co-expression

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gene co-occurrence

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[Homology]

Score

yliB

Putative peptide transporter subunit: periplasmic-binding component of ABC superfamily. (540 aa)

Predicted Functional Partners:

yliC

0.974

dppC

0.963

MPLA_1500018

0.918

oppA

0.915

MPLA_180018

0.909

yecS-3

0.908

dppA

0.904

MPLA_160017

0.901

MPLA_100039

0.896

MPLA_1070021

0.896

Your Current Organism:

Mesorhizobium sp. ORS3359

NCBI taxonomy Id: 408184
Other names: M. sp. ORS 3359, Mesorhizobium sp. ORS 3359

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structured XML interaction data, according to the 'PSI-MI' data standard

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... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
MPLA_100039	MPLA_1070021	MPLA_100039	MPLA_1070021	Extracellular solute-binding protein family 5.	Transport permease protein.	0.896
MPLA_100039	MPLA_1500018	MPLA_100039	MPLA_1500018	Extracellular solute-binding protein family 5.	ABC transporter, periplasmic oligopeptide-binding protein.	0.896
MPLA_100039	MPLA_160017	MPLA_100039	MPLA_160017	Extracellular solute-binding protein family 5.	Choline ABC transporter, periplasmic binding protein.	0.896
MPLA_100039	dppA	MPLA_100039	MPLA_800018	Extracellular solute-binding protein family 5.	Dipeptide transporter periplasmic-binding component of ABC superfamily.	0.896
MPLA_100039	dppC	MPLA_100039	MPLA_180017	Extracellular solute-binding protein family 5.	Dipeptide transporter membrane component of ABC superfamily.	0.609
MPLA_100039	oppA	MPLA_100039	MPLA_1800144	Extracellular solute-binding protein family 5.	Oligopeptide transporter subunit periplasmic-binding component of ABC superfamily.	0.896
MPLA_100039	yecS-3	MPLA_100039	MPLA_990002	Extracellular solute-binding protein family 5.	Putative transporter subunit: permease component of ABC superfamily transporter.	0.896
MPLA_100039	yliB	MPLA_100039	MPLA_180015	Extracellular solute-binding protein family 5.	Putative peptide transporter subunit: periplasmic-binding component of ABC superfamily.	0.896
MPLA_100039	yliC	MPLA_100039	MPLA_180016	Extracellular solute-binding protein family 5.	Putative peptide transporter permease subunit: membrane component of ABC superfamily.	0.612
MPLA_1070021	MPLA_100039	MPLA_1070021	MPLA_100039	Transport permease protein.	Extracellular solute-binding protein family 5.	0.896
MPLA_1070021	MPLA_1500018	MPLA_1070021	MPLA_1500018	Transport permease protein.	ABC transporter, periplasmic oligopeptide-binding protein.	0.896
MPLA_1070021	MPLA_160017	MPLA_1070021	MPLA_160017	Transport permease protein.	Choline ABC transporter, periplasmic binding protein.	0.896
MPLA_1070021	dppA	MPLA_1070021	MPLA_800018	Transport permease protein.	Dipeptide transporter periplasmic-binding component of ABC superfamily.	0.896
MPLA_1070021	oppA	MPLA_1070021	MPLA_1800144	Transport permease protein.	Oligopeptide transporter subunit periplasmic-binding component of ABC superfamily.	0.896
MPLA_1070021	yecS-3	MPLA_1070021	MPLA_990002	Transport permease protein.	Putative transporter subunit: permease component of ABC superfamily transporter.	0.896
MPLA_1070021	yliB	MPLA_1070021	MPLA_180015	Transport permease protein.	Putative peptide transporter subunit: periplasmic-binding component of ABC superfamily.	0.896
MPLA_1500018	MPLA_100039	MPLA_1500018	MPLA_100039	ABC transporter, periplasmic oligopeptide-binding protein.	Extracellular solute-binding protein family 5.	0.896
MPLA_1500018	MPLA_1070021	MPLA_1500018	MPLA_1070021	ABC transporter, periplasmic oligopeptide-binding protein.	Transport permease protein.	0.896
MPLA_1500018	MPLA_160017	MPLA_1500018	MPLA_160017	ABC transporter, periplasmic oligopeptide-binding protein.	Choline ABC transporter, periplasmic binding protein.	0.896
MPLA_1500018	dppA	MPLA_1500018	MPLA_800018	ABC transporter, periplasmic oligopeptide-binding protein.	Dipeptide transporter periplasmic-binding component of ABC superfamily.	0.919