Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
MPLA_180020LysR substrate-binding protein; Belongs to the LysR transcriptional regulatory family. (291 aa)    
Predicted Functional Partners:
MPLA_1390039
LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.751
MPLA_930028
Transcriptional regulatory protein; Belongs to the LysR transcriptional regulatory family.
  
     0.629
MPLA_90053
LysR substrate-binding protein; Belongs to the LysR transcriptional regulatory family.
  
     0.618
MPLA_180021
Uncharacterized oxidoreductase MexAM1_META1p0182.
 
     0.617
MPLA_570056
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.606
MPLA_1220036
Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.602
MPLA_770035
Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.590
MPLA_1230027
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.574
MPLA_290027
Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.564
MPLA_180023
4-oxalocrotonate tautomerase; Belongs to the 4-oxalocrotonate tautomerase family.
 
     0.549
Your Current Organism:
Mesorhizobium sp. ORS3359
NCBI taxonomy Id: 408184
Other names: M. sp. ORS 3359, Mesorhizobium sp. ORS 3359
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