Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
MPLA_18002114-carboxymuconolactone decarboxylase. (106 aa)    
Predicted Functional Partners:
MPLA_1800212
Transcriptional regulatory protein.
 
     0.903
pcaC
4-carboxymuconolactone decarboxylase.
  
  
  0.855
MPLA_90090
3-carboxy-cis,cis-muconate cycloisomerase.
  
 
 0.784
MPLA_1800210
Uncharacterized protein.
       0.773
purB
Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.
  
 
 0.679
MPLA_90086
3-oxoadipate enol-lactonase.
     
 0.615
pip
Proline iminopeptidase; Belongs to the peptidase S33 family.
     
 0.606
MPLA_730070
Alpha/beta hydrolase fold protein.
     
 0.606
catJ
3-oxoadipate CoA-transferase subunit B.
  
 
 0.579
catI
3-oxoadipate CoA-transferase subunit A.
  
 
 0.564
Your Current Organism:
Mesorhizobium sp. ORS3359
NCBI taxonomy Id: 408184
Other names: M. sp. ORS 3359, Mesorhizobium sp. ORS 3359
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