Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
MPLA_120007 | MPLA_180052 | Activator of Hsp90 ATPase-like protein. | Transcriptional regulator. | 0.474 |
MPLA_120007 | MPLA_580031 | Activator of Hsp90 ATPase-like protein. | Transcriptional regulator, ArsR family. | 0.524 |
MPLA_140209 | MPLA_180052 | HTH arsR-type domain-containing protein. | Transcriptional regulator. | 0.767 |
MPLA_140209 | MPLA_1840005 | HTH arsR-type domain-containing protein. | Activator of Hsp90 ATPase 1 family protein. | 0.401 |
MPLA_140209 | MPLA_250013 | HTH arsR-type domain-containing protein. | ArsR family transcriptional regulator. | 0.705 |
MPLA_140209 | MPLA_580031 | HTH arsR-type domain-containing protein. | Transcriptional regulator, ArsR family. | 0.709 |
MPLA_140209 | MPLA_580052 | HTH arsR-type domain-containing protein. | Uncharacterized protein. | 0.504 |
MPLA_1550019 | MPLA_180052 | Bifunctional deaminase-reductase domain-containing protein. | Transcriptional regulator. | 0.430 |
MPLA_180050 | MPLA_180051 | Alpha/beta hydrolase fold protein. | Uncharacterized protein. | 0.555 |
MPLA_180050 | MPLA_180052 | Alpha/beta hydrolase fold protein. | Transcriptional regulator. | 0.533 |
MPLA_180050 | MPLA_180053 | Alpha/beta hydrolase fold protein. | Uncharacterized protein. | 0.535 |
MPLA_180051 | MPLA_180050 | Uncharacterized protein. | Alpha/beta hydrolase fold protein. | 0.555 |
MPLA_180051 | MPLA_180052 | Uncharacterized protein. | Transcriptional regulator. | 0.834 |
MPLA_180051 | MPLA_180053 | Uncharacterized protein. | Uncharacterized protein. | 0.882 |
MPLA_180052 | MPLA_120007 | Transcriptional regulator. | Activator of Hsp90 ATPase-like protein. | 0.474 |
MPLA_180052 | MPLA_140209 | Transcriptional regulator. | HTH arsR-type domain-containing protein. | 0.767 |
MPLA_180052 | MPLA_1550019 | Transcriptional regulator. | Bifunctional deaminase-reductase domain-containing protein. | 0.430 |
MPLA_180052 | MPLA_180050 | Transcriptional regulator. | Alpha/beta hydrolase fold protein. | 0.533 |
MPLA_180052 | MPLA_180051 | Transcriptional regulator. | Uncharacterized protein. | 0.834 |
MPLA_180052 | MPLA_180053 | Transcriptional regulator. | Uncharacterized protein. | 0.927 |
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