Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
MPLA_180063Putative cytoplasmic protein. (232 aa)    
Predicted Functional Partners:
rpmI
50S ribosomal protein L35; Belongs to the bacterial ribosomal protein bL35 family.
 
    0.818
MPLA_250044
Uncharacterized protein.
  
   
 0.790
MPLA_580020
UPF0335 protein MPLA_580020; Belongs to the UPF0335 family.
  
   
 0.783
lysS
Lysine--tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
    0.778
MPLA_390014
Import inner membrane translocase subunit Tim44.
  
     0.757
MPLA_1170061
Double-strand break repair helicase AddA; Belongs to the helicase family. UvrD subfamily.
  
     0.755
MPLA_1170060
Double-strand break repair protein AddB.
  
     0.748
recO
DNA repair protein RecO; Involved in DNA repair and RecF pathway recombination.
  
     0.741
MPLA_500007
Outer-membrane lipoprotein carrier protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane).
  
     0.705
MPLA_1400003
Electron transfer flavoprotein-ubiquinone oxidoreductase; Accepts electrons from ETF and reduces ubiquinone.
   
    0.695
Your Current Organism:
Mesorhizobium sp. ORS3359
NCBI taxonomy Id: 408184
Other names: M. sp. ORS 3359, Mesorhizobium sp. ORS 3359
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