Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MPLA_180111Uncharacterized protein. (81 aa)    
Predicted Functional Partners:
MPLA_1360039
OmpA-like domain-containing protein.
  
 0.862
MPLA_1360054
OmpA-like domain-containing protein.
  
 0.862
flgE
Flagellar hook protein FlgE.
   
 0.712
tolB
Tol-Pal system protein TolB; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
  
 0.688
motB
Flagellar motor protein MotB.
    
  0.659
MPLA_1620048
OmpA/MotB domain protein.
    
  0.659
MPLA_580044
OmpA-like domain-containing protein.
    
  0.659
omp2b
Porin; Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane.
   
 0.656
omp2b-2
Porin; Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane.
   
 0.656
omp2b-3
Porin; Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane.
   
 0.656
Your Current Organism:
Mesorhizobium sp. ORS3359
NCBI taxonomy Id: 408184
Other names: M. sp. ORS 3359, Mesorhizobium sp. ORS 3359
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