Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
MPLA_180115UPF0391 membrane protein MPLA_180115. (54 aa)    
Predicted Functional Partners:
yjbJ
Putative stress response protein; Belongs to the UPF0337 (CsbD) family.
 
    0.962
MPLA_30103
Uncharacterized protein.
 
    0.874
MPLA_830022
Uncharacterized protein.
  
    0.805
phyR
Regulatory protein PhyR.
 
     0.775
MPLA_770087
Uncharacterized protein.
   
    0.621
MPLA_180114
HWE histidine kinase.
 
     0.619
rfbE
O-antigen export system ATP-binding protein RfbE.
   
    0.522
glmS
Glutamine--fructose-6-phosphate aminotransferase [isomerizing]; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source.
   
    0.522
MPLA_180118
RNA polymerase sigma factor; Belongs to the sigma-70 factor family. ECF subfamily.
 
     0.463
MPLA_190001
Uncharacterized protein.
 
    0.426
Your Current Organism:
Mesorhizobium sp. ORS3359
NCBI taxonomy Id: 408184
Other names: M. sp. ORS 3359, Mesorhizobium sp. ORS 3359
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