STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MPLA_1830039Integral membrane sugar transporter. (629 aa)    
Predicted Functional Partners:
rpmE
50S ribosomal protein L31; Binds the 23S rRNA; Belongs to the bacterial ribosomal protein bL31 family. Type A subfamily.
   
    0.752
rpmJ
50S ribosomal protein L36; Belongs to the bacterial ribosomal protein bL36 family.
   
    0.697
MPLA_1550039
Riboflavin synthase alpha chain.
   
    0.619
MPLA_860052
Secretion protein HlyD family protein.
  
  0.467
MPLA_70023
Putative secretion protein.
  
  0.466
MPLA_320080
Secretion protein HlyD family protein.
  
  0.448
MPLA_870003
AMP-dependent synthetase and ligase.
  
 
 0.443
trpE(G
Anthranilate synthase.
    
  0.438
MPLA_730027
Secretion protein HlyD family protein.
  
  0.432
MPLA_860060
Secretion protein HlyD family protein.
  
  0.431
Your Current Organism:
Mesorhizobium sp. ORS3359
NCBI taxonomy Id: 408184
Other names: M. sp. ORS 3359, Mesorhizobium sp. ORS 3359
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