Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
MPLA_1830174Peptidase A2 domain-containing protein. (234 aa)    
Predicted Functional Partners:
MPLA_1830173
Uncharacterized protein.
       0.837
cobT
Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase.
  
    0.617
MPLA_1620062
Uncharacterized protein.
  
     0.528
fixH
Nitrogen fixation protein FixH.
  
     0.526
MPLA_830025
Nitrogen fixation protein fixH.
  
     0.523
MPLA_580049
Sel1 domain-containing protein repeat-containing protein.
     
  0.518
MPLA_430032
DUF1737 domain-containing protein.
  
     0.487
MPLA_440044
Uncharacterized protein.
  
     0.467
MPLA_220010
ABC-type cobalamin/Fe3+-siderophore transport system, ATPase component.
  
     0.450
MPLA_720037
Uncharacterized protein.
  
     0.415
Your Current Organism:
Mesorhizobium sp. ORS3359
NCBI taxonomy Id: 408184
Other names: M. sp. ORS 3359, Mesorhizobium sp. ORS 3359
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