MPLA_1830206 protein (Mesorhizobium sp. ORS3359)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

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[Homology]

Score

MPLA_1830206

Glycosyltransferase. (290 aa)

Predicted Functional Partners:

MPLA_1830207

0.874

MPLA_230067

0.845

MPLA_1830189

0.786

MPLA_1830205

0.718

MPLA_1820001

0.571

rfbD

0.537

exoF

0.519

MPLA_1830204

0.517

mraY

0.514

MPLA_1860016

0.485

Your Current Organism:

Mesorhizobium sp. ORS3359

NCBI taxonomy Id: 408184
Other names: M. sp. ORS 3359, Mesorhizobium sp. ORS 3359

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TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
MPLA_1820001	MPLA_1830206	MPLA_1820001	MPLA_1830206	Uncharacterized protein.	Glycosyltransferase.	0.571
MPLA_1820001	MPLA_1830207	MPLA_1820001	MPLA_1830207	Uncharacterized protein.	OMA family outer membrane saccharide export protein.	0.500
MPLA_1820001	MPLA_1860016	MPLA_1820001	MPLA_1860016	Uncharacterized protein.	Lipopolysaccharide biosynthesis protein.	0.432
MPLA_1830189	MPLA_1830206	MPLA_1830189	MPLA_1830206	Uncharacterized protein.	Glycosyltransferase.	0.786
MPLA_1830204	MPLA_1830205	MPLA_1830204	MPLA_1830205	Glycosyltransferase.	Glycosyl transferase.	0.746
MPLA_1830204	MPLA_1830206	MPLA_1830204	MPLA_1830206	Glycosyltransferase.	Glycosyltransferase.	0.517
MPLA_1830204	MPLA_1830207	MPLA_1830204	MPLA_1830207	Glycosyltransferase.	OMA family outer membrane saccharide export protein.	0.425
MPLA_1830204	MPLA_230067	MPLA_1830204	MPLA_230067	Glycosyltransferase.	Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase.	0.625
MPLA_1830204	rfbD	MPLA_1830204	MPLA_930053	Glycosyltransferase.	Putative UDP-galactopyranose mutase.	0.469
MPLA_1830205	MPLA_1830204	MPLA_1830205	MPLA_1830204	Glycosyl transferase.	Glycosyltransferase.	0.746
MPLA_1830205	MPLA_1830206	MPLA_1830205	MPLA_1830206	Glycosyl transferase.	Glycosyltransferase.	0.718
MPLA_1830205	MPLA_1830207	MPLA_1830205	MPLA_1830207	Glycosyl transferase.	OMA family outer membrane saccharide export protein.	0.597
MPLA_1830205	MPLA_230067	MPLA_1830205	MPLA_230067	Glycosyl transferase.	Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase.	0.740
MPLA_1830205	rfbD	MPLA_1830205	MPLA_930053	Glycosyl transferase.	Putative UDP-galactopyranose mutase.	0.469
MPLA_1830206	MPLA_1820001	MPLA_1830206	MPLA_1820001	Glycosyltransferase.	Uncharacterized protein.	0.571
MPLA_1830206	MPLA_1830189	MPLA_1830206	MPLA_1830189	Glycosyltransferase.	Uncharacterized protein.	0.786
MPLA_1830206	MPLA_1830204	MPLA_1830206	MPLA_1830204	Glycosyltransferase.	Glycosyltransferase.	0.517
MPLA_1830206	MPLA_1830205	MPLA_1830206	MPLA_1830205	Glycosyltransferase.	Glycosyl transferase.	0.718
MPLA_1830206	MPLA_1830207	MPLA_1830206	MPLA_1830207	Glycosyltransferase.	OMA family outer membrane saccharide export protein.	0.874
MPLA_1830206	MPLA_1860016	MPLA_1830206	MPLA_1860016	Glycosyltransferase.	Lipopolysaccharide biosynthesis protein.	0.485