STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MPLA_1850004Fluoroacetate dehalogenase. (310 aa)    
Predicted Functional Partners:
MPLA_870003
AMP-dependent synthetase and ligase.
  
 0.904
MPLA_1850003
Uncharacterized protein.
       0.773
MPLA_1800195
(S)-2-haloacid dehalogenase 4A.
  
 
 0.731
pdhB
Pyruvate dehydrogenase E1 component subunit beta; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.
   
 0.726
MPLA_1670035
2-haloacid halidohydrolase IVa.
   
 
  0.677
MPLA_1110003
Aldehyde Dehydrogenase; Belongs to the aldehyde dehydrogenase family.
     
  0.657
MPLA_690006
Putative aldehyde dehydrogenase SE_1720.
     
  0.657
puuC
Gamma-Glu-gamma-aminobutyraldehyde dehydrogenase, NAD(P)H-dependent; Belongs to the aldehyde dehydrogenase family.
     
  0.655
adhC
S-(hydroxymethyl)glutathione dehydrogenase; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily.
    
  0.638
MPLA_180025
AB hydrolase-1 domain-containing protein.
  
     0.624
Your Current Organism:
Mesorhizobium sp. ORS3359
NCBI taxonomy Id: 408184
Other names: M. sp. ORS 3359, Mesorhizobium sp. ORS 3359
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