Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MPLA_1850013AzlC family protein. (257 aa)    
Predicted Functional Partners:
MPLA_1850014
Branched-chain amino acid transport.
 
  
 0.976
MPLA_1190124
Uncharacterized protein.
 
  
 0.729
MPLA_140089
Uncharacterized protein.
     
  0.577
lrp-3
DNA-binding transcriptional dual regulator, leucine-binding.
  
    0.542
MPLA_1390030
Inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
     
  0.518
MPLA_90081
ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family.
     
  0.518
MPLA_1120016
Inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
     
  0.508
MPLA_90080
ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family.
     
  0.508
MPLA_1120018
Branched-chain amino acid ABC transporter periplasmic amino acid-binding protein.
     
  0.480
MPLA_180019
ABC-type branched-chain amino acid transport system, periplasmic component.
     
  0.480
Your Current Organism:
Mesorhizobium sp. ORS3359
NCBI taxonomy Id: 408184
Other names: M. sp. ORS 3359, Mesorhizobium sp. ORS 3359
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