Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
lysN2-aminoadipate transaminase. (408 aa)    
Predicted Functional Partners:
MPLA_2140019
Putative HTH-type transcriptional regulator GntR family.
  
     0.756
MPLA_810026
Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
 
 
  0.716
gcvP
Glycine dehydrogenase (decarboxylating); The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.
   
 
 0.681
MPLA_140275
Glutamine synthetase; Belongs to the glutamine synthetase family.
     
  0.667
eda
annotation not available
     
  0.667
aceA
Isocitrate lyase.
     
  0.667
glcD
Glycolate oxidase, subunit GlcD.
     
  0.667
glcE
Glycolate oxidase FAD binding subunit.
     
  0.667
glnII
Glutamine synthetase.
     
  0.667
glnA
Glutamine synthetase.
     
  0.667
Your Current Organism:
Mesorhizobium sp. ORS3359
NCBI taxonomy Id: 408184
Other names: M. sp. ORS 3359, Mesorhizobium sp. ORS 3359
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