Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MPLA_1860018Monooxygenase FAD-binding. (402 aa)    
Predicted Functional Partners:
MPLA_1860017
Uncharacterized protein.
 
     0.886
nodS
Nodulation protein S; SAM-utilizing methyltransferase involved in nod factor synthesis.
  
 
  0.727
MPLA_760008
Fumarate hydratase class I; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family.
     
  0.716
MPLA_1390152
Uncharacterized protein.
    
  0.662
MPLA_1800107
S-adenosyl-dependent methyltransferase.
    
  0.662
MPLA_1830198
Uncharacterized protein.
    
  0.662
MPLA_2140018
Putative Methyltransferase type 12.
    
  0.662
MPLA_670021
Anaerobic dehydrogenase, typically selenocysteine-containing; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
     
 0.662
MPLA_720069
Uncharacterized protein.
    
  0.662
MPLA_830059
Putative 3-demethylubiquinone-9 3-O-methyltransferase.
    
  0.662
Your Current Organism:
Mesorhizobium sp. ORS3359
NCBI taxonomy Id: 408184
Other names: M. sp. ORS 3359, Mesorhizobium sp. ORS 3359
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