Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
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[Homology]
Score
MPLA_190008Sulfatase. (520 aa)    
Predicted Functional Partners:
Sumf
Sulfatase-modifying factor 1.
 
   0.822
rpsD
30S ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.
   
 
  0.683
rhlE
RNA helicase.
    
 0.658
MPLA_440005
DEAD/DEAH helicase; Belongs to the DEAD box helicase family.
    
 0.658
ARSI
Arylsulfatase I.
 
  
0.646
MPLA_550002
Heparinase II/III family protein.
    
  0.639
tsaC
4-formylbenzenesulfonate dehydrogenase TsaC1/TsaC2.
  
 
  0.625
MPLA_1390045
Glucose-methanol-choline oxidoreductase.
    
 0.593
betA
Choline dehydrogenase, a flavoprotein.
    
 0.593
betA-2
Choline dehydrogenase, a flavoprotein.
    
 0.593
Your Current Organism:
Mesorhizobium sp. ORS3359
NCBI taxonomy Id: 408184
Other names: M. sp. ORS 3359, Mesorhizobium sp. ORS 3359
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