Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
MPLA_1930003Putative AraC family transcriptional regulator. (332 aa)    
Predicted Functional Partners:
MPLA_1800179
Transcriptional regulator, AraC family.
  
   0.679
thcD-2
Rhodocoxin reductase.
       0.655
lcdH-3
L-carnitine dehydrogenase.
       0.641
MPLA_1930006
Short-chain dehydrogenase/reductase SDR.
       0.641
MPLA_1830331
AraC family transcriptional regulator.
  
   0.613
MPLA_100011
AraC family transcriptional regulator.
  
   0.609
ydcW
Medium chain aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
       0.594
MPLA_1930008
Uncharacterized protein.
       0.594
MPLA_310015
Putative transcriptional regulator.
  
   0.578
rpoD
RNA polymerase sigma factor RpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth.
    
   0.539
Your Current Organism:
Mesorhizobium sp. ORS3359
NCBI taxonomy Id: 408184
Other names: M. sp. ORS 3359, Mesorhizobium sp. ORS 3359
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