STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MPLA_200005Phytoene dehydrogenase. (539 aa)    
Predicted Functional Partners:
MPLA_310010
Squalene/phytoene synthase.
  
 
 0.913
MPLA_200004
Phytoene dehydrogenase.
 
    
0.819
MPLA_200006
Methyltransferase type 11.
 
 
  0.771
MPLA_200003
Glycine cleavage T protein (Aminomethyl transferase); Belongs to the GcvT family.
 
     0.706
ehhadh
Peroxisomal bifunctional enzyme; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 
  0.686
MPLA_200002
Uncharacterized protein.
       0.654
MPLA_1400003
Electron transfer flavoprotein-ubiquinone oxidoreductase; Accepts electrons from ETF and reduces ubiquinone.
  
 
 0.653
MPLA_200010
Amine oxidase.
 
  
 0.649
fixC
Protein FixC; Part of an electron transfer system. Belongs to the ETF-QO/FixC family.
  
 
 0.624
MPLA_1680006
3-hydroxyacyl-CoA dehydrogenase NAD-binding protein.
   
 
  0.608
Your Current Organism:
Mesorhizobium sp. ORS3359
NCBI taxonomy Id: 408184
Other names: M. sp. ORS 3359, Mesorhizobium sp. ORS 3359
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