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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MPLA_200007Transcriptional regulator, TetR family. (239 aa)    
Predicted Functional Partners:
MPLA_200006
Methyltransferase type 11.
 
 
   0.867
MPLA_200008
Spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein.
 
     0.707
MPLA_200005
Phytoene dehydrogenase.
 
  
  0.607
MPLA_200004
Phytoene dehydrogenase.
 
  
  0.591
MPLA_200009
Spermidine/putrescine-binding protein.
 
     0.563
MPLA_200015
Dioxygenase alpha subunit.
  
  
  0.489
MPLA_200010
Amine oxidase.
       0.416
Your Current Organism:
Mesorhizobium sp. ORS3359
NCBI taxonomy Id: 408184
Other names: M. sp. ORS 3359, Mesorhizobium sp. ORS 3359
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