STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MPLA_200008Spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein. (360 aa)    
Predicted Functional Partners:
MPLA_200012
Binding-protein-dependent transport systems inner membrane component.
 
  0.955
MPLA_660002
ABC transporter, permease protein.
 
  0.955
potI
Putrescine transporter subunit: membrane component of ABC superfamily.
 
  0.938
potG-5
Spermidine/putrescine import ATP-binding protein PotA; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.
  
  0.935
potB-2
Polyamine transporter subunit membrane component of ABC superfamily.
 
 
  0.916
MPLA_750081
Putative transmembrane component of ABC transporter.
 
  0.916
potB
Polyamine transporter subunit membrane component of ABC superfamily.
 
 
  0.905
potH
Putrescine transporter subunit: membrane component of ABC superfamily.
 
 
  0.892
MPLA_650020
Binding-protein-dependent transport systems inner membrane component.
 
 
  0.878
MPLA_200009
Spermidine/putrescine-binding protein.
 
  
 
0.874
Your Current Organism:
Mesorhizobium sp. ORS3359
NCBI taxonomy Id: 408184
Other names: M. sp. ORS 3359, Mesorhizobium sp. ORS 3359
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