STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MPLA_200025YkuD domain-containing protein. (151 aa)    
Predicted Functional Partners:
MPLA_1830106
Serine-type D-Ala-D-Ala carboxypeptidase; Belongs to the peptidase S11 family.
     
  0.738
MPLA_1190094
Peptidoglycan glycosyltransferase.
     
 0.654
MPLA_1830277
Serine-type D-Ala-D-Ala carboxypeptidase; Belongs to the peptidase S11 family.
     
  0.651
MPLA_210008
Penicillin-binding protein; Belongs to the peptidase S11 family.
     
  0.651
MPLA_310017
Peptidase M23.
    
 0.528
MPLA_160056
Uncharacterized protein.
  
     0.505
MPLA_1190019
Beta-lactamase.
     
  0.504
MPLA_1320002
Esterase.
     
  0.504
MPLA_160116
6-aminohexanoate-dimer hydrolase.
     
  0.504
MPLA_160117
6-aminohexanoate-dimer hydrolase.
     
  0.504
Your Current Organism:
Mesorhizobium sp. ORS3359
NCBI taxonomy Id: 408184
Other names: M. sp. ORS 3359, Mesorhizobium sp. ORS 3359
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