STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
adcProbable acetoacetate decarboxylase; Catalyzes the conversion of acetoacetate to acetone and carbon dioxide; Belongs to the ADC family. (292 aa)    
Predicted Functional Partners:
MPLA_200031
Patatin.
 
   
 0.948
MPLA_200033
D-beta-hydroxybutyrate dehydrogenase (BDH) (3-hydroxybutyrate dehydrogenase) (3-HBDH).
 
  
  0.849
acsA-2
Acetoacetyl-coenzyme A synthetase.
     
  0.822
catI
3-oxoadipate CoA-transferase subunit A.
    
 0.759
MPLA_770040
Patatin.
 
   
 0.746
catJ
3-oxoadipate CoA-transferase subunit B.
    
 0.735
acsA
Acetoacetyl-coenzyme A synthetase.
     
  0.691
MPLA_750085
D-beta-hydroxybutyrate dehydrogenase.
     
  0.650
bdhA
D-beta-hydroxybutyrate dehydrogenase.
     
  0.650
MPLA_670023
Alcohol dehydrogenase GroES domain protein.
  
  
  0.638
Your Current Organism:
Mesorhizobium sp. ORS3359
NCBI taxonomy Id: 408184
Other names: M. sp. ORS 3359, Mesorhizobium sp. ORS 3359
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