STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MPLA_20007Permease protein of ABC transporter. (334 aa)    
Predicted Functional Partners:
MPLA_20006
ABC transporter domain-containing protein.
 
  0.991
MPLA_20005
ATP-binding protein of ABC transporter.
 
  0.987
MPLA_20003
FAD-binding PCMH-type domain-containing protein.
 
     0.918
MPLA_390003
Putative ABC transporter, permease protein aliphatic sulfonates transporter.
  
 0.914
MPLA_20004
Amidohydrolase 3.
 
     0.905
MPLA_110013
Putative ABC transporter, ATP-binding protein.
 
  0.896
tauB
Taurine transporter subunit ATP-binding component of ABC superfamily.
  
  0.883
MPLA_20002
NAD(P)H dehydrogenase (Quinone).
 
     0.880
MPLA_20001
NAD(P)H dehydrogenase (Quinone).
 
     0.874
msuE
FMN reductase (NADPH).
  
 
 0.853
Your Current Organism:
Mesorhizobium sp. ORS3359
NCBI taxonomy Id: 408184
Other names: M. sp. ORS 3359, Mesorhizobium sp. ORS 3359
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