STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MPLA_20008Endoribonuclease L-PSP. (127 aa)    
Predicted Functional Partners:
MPLA_20004
Amidohydrolase 3.
 
     0.770
MPLA_20003
FAD-binding PCMH-type domain-containing protein.
 
     0.769
MPLA_20009
Creatininase.
 
     0.743
MPLA_20002
NAD(P)H dehydrogenase (Quinone).
 
  
  0.719
MPLA_20007
Permease protein of ABC transporter.
 
     0.714
MPLA_20001
NAD(P)H dehydrogenase (Quinone).
 
  
  0.708
MPLA_20005
ATP-binding protein of ABC transporter.
 
     0.623
fusA
Elongation factor G; Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF-2 subfamily.
    
  0.587
MPLA_70047
Elongation factor G-like protein.
    
  0.587
MPLA_20006
ABC transporter domain-containing protein.
 
     0.573
Your Current Organism:
Mesorhizobium sp. ORS3359
NCBI taxonomy Id: 408184
Other names: M. sp. ORS 3359, Mesorhizobium sp. ORS 3359
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