STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MPLA_20009Creatininase. (265 aa)    
Predicted Functional Partners:
MPLA_20004
Amidohydrolase 3.
 
  
  0.971
MPLA_1850039
Cytosine deaminase.
 
  
  0.902
codA
Cytosine deaminase.
 
  
  0.897
MPLA_20003
FAD-binding PCMH-type domain-containing protein.
     0.842
MPLA_20007
Permease protein of ABC transporter.
 
     0.799
MPLA_20005
ATP-binding protein of ABC transporter.
 
     0.760
MPLA_20008
Endoribonuclease L-PSP.
 
     0.743
MPLA_20006
ABC transporter domain-containing protein.
 
     0.722
ribD
Diaminohydroxyphosphoribosylaminopyrimidine deaminase; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.
    
 0.661
ndvB
Protein ndvB.
  
  
 0.587
Your Current Organism:
Mesorhizobium sp. ORS3359
NCBI taxonomy Id: 408184
Other names: M. sp. ORS 3359, Mesorhizobium sp. ORS 3359
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