Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
MPLA_200761-aminocyclopropane-1-carboxylate deaminase (ACC deaminase) (ACCD). (274 aa)    
Predicted Functional Partners:
MPLA_240001
1-aminocyclopropane-1-carboxylate deaminase (ACC deaminase) (ACCD).
 
     0.951
MPLA_380048
Cystathionine beta-synthase.
     
 0.741
bkdA
2-oxoisovalerate dehydrogenase subunit alpha.
     
  0.650
bkdA-2
2-oxoisovalerate dehydrogenase subunit beta.
     
  0.650
MPLA_20075
Putative transcriptional regulator, AsnC/Lrp family.
 
   
 0.632
MPLA_290035
Aminotransferase.
     
  0.578
sseA
3-mercaptopyruvate sulfurtransferase.
     
 0.577
metC-2
Cystathionine beta-lyase, PLP-dependent.
     
 0.574
MPLA_1620020
Galactarate dehydratase.
     
  0.552
MPLA_800005
Aminotransferase.
  
  
  0.532
Your Current Organism:
Mesorhizobium sp. ORS3359
NCBI taxonomy Id: 408184
Other names: M. sp. ORS 3359, Mesorhizobium sp. ORS 3359
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