Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MPLA_2130072Uncharacterized protein. (579 aa)    
Predicted Functional Partners:
MPLA_2130074
Uncharacterized protein.
 
     0.875
MPLA_2130076
Uncharacterized protein.
 
     0.866
MPLA_2130077
Replication initiator protein A.
 
     0.863
MPLA_2130075
Conjugal transfer protein TraF.
 
     0.862
MPLA_2130078
HTH_17 domain-containing protein.
 
     0.862
MPLA_2130048
Uncharacterized protein.
 
     0.817
MPLA_2130049
Putative plasmid transfer factor, traG protein.
 
   
 0.811
MPLA_2130079
Uncharacterized protein.
 
     0.811
traG
Conjugal transfer protein TraG.
 
   
 0.799
MPLA_2130027
Putative conjugal transfer protein trbJ.
 
     0.788
Your Current Organism:
Mesorhizobium sp. ORS3359
NCBI taxonomy Id: 408184
Other names: M. sp. ORS 3359, Mesorhizobium sp. ORS 3359
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