STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MPLA_2130100Prophage CP4-57 regulatory. (108 aa)    
Predicted Functional Partners:
MPLA_2130101
CP4-like integrase; Belongs to the 'phage' integrase family.
 
  
 0.786
MPLA_1650101
Integrase family protein; Belongs to the 'phage' integrase family.
 
  
 0.784
gltB
Glutamate synthase, large subunit.
    
  0.696
mdh
Malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 3 family.
     
 0.604
acnA
Aconitate hydratase; Catalyzes the isomerization of citrate to isocitrate via cis- aconitate.
     
 0.573
maeB
Putative fused malic enzyme oxidoreductase phosphotransacetylase.
     
 0.522
maeB-2
Putative fused malic enzyme oxidoreductase phosphotransacetylase.
     
 0.522
MPLA_140027
Oxidoreductase.
  
  
  0.442
MPLA_1280081
Plasmid maintenance system killer protein.
  
   
 0.436
Your Current Organism:
Mesorhizobium sp. ORS3359
NCBI taxonomy Id: 408184
Other names: M. sp. ORS 3359, Mesorhizobium sp. ORS 3359
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